Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin vapb | BST45_14665 | Not Available | Positive | 3111610 - 3111825 | 7651.04 |
| vapc toxin family pin domain ribonuclease | BST45_14670 | Not Available | Positive | 3111822 - 3112238 | 15773.8 |
| restriction endonuclease subunit m | BST45_14675 | Not Available | Positive | 3112559 - 3114184 | 59984.0 |
| vapc toxin family pin domain ribonuclease | BST45_14680 | Not Available | Negative | 3114278 - 3114715 | 15950.2 |
| duf2191 domain-containing protein | BST45_14685 | Not Available | Negative | 3114712 - 3114966 | 9435.2 |
| hypothetical protein | BST45_14690 | Not Available | Positive | 3115131 - 3115409 | 10403.7 |
| thymidylate synthase (fad) | BST45_14695 | Not Available | Positive | 3115420 - 3116172 | 27689.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | BST45_14700 | Not Available | Positive | 3116288 - 3117190 | 30853.1 |
| ribonuclease j | BST45_14705 | Not Available | Positive | 3117207 - 3118883 | 59424.2 |
| sam-dependent methyltransferase | BST45_14710 | Not Available | Negative | 3118893 - 3119765 | 32811.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


