Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ppe family protein | BST45_14340 | Not Available | Negative | 3039576 - 3041272 | 56599.6 |
| luxr family transcriptional regulator | BST45_14345 | Not Available | Negative | 3041789 - 3042703 | 33425.3 |
| hypothetical protein | BST45_14350 | Not Available | Positive | 3043489 - 3045186 | 58734.2 |
| 3-hydroxyacyl-coa dehydrogenase | BST45_14355 | Not Available | Negative | 3045071 - 3047215 | 75825.1 |
| acetyl-coa acetyltransferase | BST45_14360 | Not Available | Negative | 3047220 - 3048431 | 42398.9 |
| aminotransferase | BST45_14365 | Not Available | Positive | 3048660 - 3049859 | 42424.8 |
| cyclase | BST45_14370 | Not Available | Negative | 3049852 - 3050292 | 16583.8 |
| cyclase | BST45_14375 | Not Available | Negative | 3050355 - 3050810 | 16986.3 |
| carnitine dehydratase | BST45_14380 | Not Available | Negative | 3050868 - 3052001 | 39465.6 |
| cyclase | BST45_14385 | Not Available | Negative | 3052007 - 3052450 | 16082.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


