Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin | BST45_14135 | Not Available | Negative | 2986003 - 2986257 | 9506.29 |
| hypothetical protein | BST45_14140 | Not Available | Negative | 2986315 - 2987844 | 42906.1 |
| proteasome subunit alpha | BST45_14145 | Not Available | Negative | 2987988 - 2988782 | 28738.8 |
| proteasome subunit beta | BST45_14150 | Not Available | Negative | 2988779 - 2989672 | 30974.5 |
| ubiquitin-like protein pup | BST45_14155 | Not Available | Negative | 2989669 - 2989863 | 7021.72 |
| proteasome accessory factor pafa2 | BST45_14160 | Not Available | Negative | 2989967 - 2991547 | 57242.2 |
| hypothetical protein | BST45_14165 | Not Available | Positive | 2992117 - 2993310 | 42280.5 |
| hypothetical protein | BST45_14170 | Not Available | Positive | 2993321 - 2993962 | 23369.6 |
| proteasome atpase | BST45_14175 | Not Available | Negative | 2993966 - 2995795 | 67557.1 |
| hypothetical protein | BST45_14180 | Not Available | Positive | 2996028 - 2996573 | 18374.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


