Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flap endonuclease | BST45_14085 | Not Available | Positive | 2974628 - 2975587 | 33787.6 |
| hypothetical protein | BST45_14090 | Not Available | Negative | 2975591 - 2976358 | 27031.2 |
| dead/deah box helicase | BST45_14095 | Not Available | Negative | 2976410 - 2979121 | 98496.8 |
| twin arginine-targeting protein translocase tatc | BST45_14100 | Not Available | Negative | 2979146 - 2980006 | 31165.7 |
| sec-independent protein translocase tata | BST45_14105 | Not Available | Negative | 2980115 - 2980378 | 9297.13 |
| protein pafc | BST45_14110 | Not Available | Negative | 2980446 - 2981414 | 34222.7 |
| wyl domain-containing protein | BST45_14115 | Not Available | Negative | 2981411 - 2982409 | 35024.8 |
| pup--protein ligase | BST45_14120 | Not Available | Negative | 2982428 - 2983771 | 50618.0 |
| hypothetical protein | BST45_14125 | Not Available | Positive | 2983913 - 2985457 | 55506.8 |
| vapc toxin family pin domain ribonuclease | BST45_14130 | Not Available | Negative | 2985484 - 2985918 | 15498.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


