Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | BST45_13695 | Not Available | Positive | 2894725 - 2896995 | 81274.8 |
| hypothetical protein | BST45_13700 | Not Available | Negative | 2897075 - 2898796 | 63629.0 |
| 2-methylcitrate synthase | BST45_13705 | Not Available | Negative | 2898873 - 2899997 | 41028.3 |
| methylisocitrate lyase | BST45_13710 | Not Available | Negative | 2899978 - 2900874 | 31481.8 |
| 2-methylcitrate dehydratase | BST45_13715 | Not Available | Negative | 2900871 - 2902385 | 54791.9 |
| cro/cl family transcriptional regulator | BST45_13720 | Not Available | Positive | 2902505 - 2903914 | 52284.1 |
| hypothetical protein | BST45_13730 | Not Available | Negative | 2904525 - 2905061 | 20114.4 |
| hypothetical protein | BST45_13735 | Not Available | Negative | 2905177 - 2905815 | 23354.8 |
| doxx family protein | BST45_13750 | Not Available | Negative | 2907353 - 2907859 | 17618.9 |
| pyruvate, phosphate dikinase | BST45_13755 | Not Available | Positive | 2907982 - 2909604 | 57330.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


