Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1059 domain-containing protein | BST45_13590 | Not Available | Negative | 2874625 - 2874771 | 5360.38 |
| fe-s cluster assembly protein hesb | BST45_13595 | Not Available | Negative | 2874768 - 2875361 | 20960.6 |
| ppox class f420-dependent enzyme | BST45_13600 | Not Available | Negative | 2875668 - 2876111 | 16278.3 |
| pyridoxamine 5-phosphate oxidase | BST45_13605 | Not Available | Positive | 2876158 - 2876679 | 18874.3 |
| gntr family transcriptional regulator | BST45_13610 | Not Available | Negative | 2876716 - 2877081 | 13177.8 |
| nad-dependent protein deacylase | BST45_13615 | Not Available | Positive | 2877119 - 2877832 | 25597.6 |
| sam-dependent methyltransferase | BST45_13620 | Not Available | Negative | 2877857 - 2878504 | 23157.9 |
| tetr family transcriptional regulator | BST45_13625 | Not Available | Negative | 2878501 - 2879247 | 26737.1 |
| hypothetical protein | BST45_13630 | Not Available | Negative | 2879240 - 2881576 | 81506.8 |
| 3-hydroxyacyl-coa dehydrogenase | BST45_13640 | Not Available | Negative | 2882106 - 2882858 | 25978.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


