Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | BST45_13535 | Not Available | Negative | 2864350 - 2866140 | 63610.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | BST45_13540 | Not Available | Negative | 2866137 - 2867126 | 34566.5 |
| polyprenyl synthetase | BST45_13545 | Not Available | Negative | 2867126 - 2868178 | 36149.6 |
| qace family quaternary ammonium compound efflux smr transporter | BST45_13550 | Not Available | Positive | 2869151 - 2869474 | 10864.7 |
| dna-binding transcriptional regulator | BST45_13555 | Not Available | Positive | 2869471 - 2870031 | 19829.8 |
| dna mismatch repair protein mutt | BST45_13565 | Not Available | Negative | 2870875 - 2871270 | 14351.2 |
| 4a-hydroxytetrahydrobiopterin dehydratase | BST45_13570 | Not Available | Positive | 2871298 - 2871582 | 10424.5 |
| mannosyltransferase | BST45_13575 | Not Available | Negative | 2871560 - 2872783 | 44000.4 |
| hypothetical protein | BST45_13580 | Not Available | Positive | 2872946 - 2873650 | 21776.4 |
| hypothetical protein | BST45_13585 | Not Available | Positive | 2873697 - 2874620 | 30335.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


