Mycobacterium shinjukuense strain CCUG 53584

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium shinjukuense strain CCUG 53584 is a notable species within the genus Mycobacterium, characterized by the presence of flagella, which is relatively uncommon among mycobacteria. This trait may confer motility advantages under certain environmental conditions, potentially aiding in its adaptability and survival. The strain has a single replicon, indicating a streamlined genome organization typical of many prokaryotic organisms. The genome is accessible through the accession number MVIK00000000.1, facilitating further genetic and genomic studies that could enhance our understanding of its biology. In terms of ecological insights, the presence of flagella in Mycobacterium shinjukuense may suggest a specific ecological niche where motility provides selective advantages, such as in biofilms or within host organisms. This capability could influence its interactions with other microorganisms and its role in microbial communities. Overall, the unique traits of Mycobacterium shinjukuense strain CCUG 53584, particularly its flagellar motility, position it as a subject of interest for further research into microbial behavior, ecology, and potential applications in biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium shinjukuense
Strainstrain CCUG 53584

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium shinjukuense strain CCUG 53584

Gene Summary

Adenine Count

711929 bp

Thymine Count

709973 bp

Guanine Count

1491976 bp

Cytosine Count

1496018 bp

Genome Length

4409896 bp

Protein-coding Genes

3834 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-deoxy-d-xylulose-5-phosphate synthaseBST45_13535Not AvailableNegative2864350 - 286614063610.3
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseBST45_13540Not AvailableNegative2866137 - 286712634566.5
polyprenyl synthetaseBST45_13545Not AvailableNegative2867126 - 286817836149.6
qace family quaternary ammonium compound efflux smr transporterBST45_13550Not AvailablePositive2869151 - 286947410864.7
dna-binding transcriptional regulatorBST45_13555Not AvailablePositive2869471 - 287003119829.8
dna mismatch repair protein muttBST45_13565Not AvailableNegative2870875 - 287127014351.2
4a-hydroxytetrahydrobiopterin dehydrataseBST45_13570Not AvailablePositive2871298 - 287158210424.5
mannosyltransferaseBST45_13575Not AvailableNegative2871560 - 287278344000.4
hypothetical proteinBST45_13580Not AvailablePositive2872946 - 287365021776.4
hypothetical proteinBST45_13585Not AvailablePositive2873697 - 287462030335.0

Displaying genes 2581 – 2590 of 3885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.