Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | BST45_13380 | Not Available | Negative | 2829698 - 2831419 | 63730.4 |
| fe3+-citrate abc transporter substrate-binding protein | BST45_13385 | Not Available | Positive | 2831611 - 2832690 | 37085.8 |
| alcohol dehydrogenase | BST45_13390 | Not Available | Positive | 2832781 - 2833821 | 37233.6 |
| endonuclease | BST45_13395 | Not Available | Negative | 2833810 - 2834184 | 13192.6 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | BST45_13400 | Not Available | Negative | 2834344 - 2835318 | 37005.5 |
| 4-hydroxyacetophenone monooxygenase | BST45_13405 | Not Available | Negative | 2835492 - 2837054 | 58465.5 |
| tetr family transcriptional regulator | BST45_13410 | Not Available | Negative | 2837175 - 2837900 | 26970.4 |
| ribonucleotide-diphosphate reductase subunit alpha | BST45_13415 | Not Available | Negative | 2838040 - 2840202 | 82148.4 |
| ribonucleotide reductase assembly protein nrdi | BST45_13420 | Not Available | Negative | 2840172 - 2840630 | 17123.5 |
| nrdh-redoxin | BST45_13425 | Not Available | Negative | 2840649 - 2840888 | 8547.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


