Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | BST45_12710 | Not Available | Positive | 2681774 - 2683873 | 75190.5 |
| transaldolase | BST45_12715 | Not Available | Positive | 2683890 - 2685008 | 40197.5 |
| glucose-6-phosphate dehydrogenase | BST45_12720 | Not Available | Positive | 2685005 - 2686549 | 57492.4 |
| glucose-6-phosphate dehydrogenase assembly protein opca | BST45_12725 | Not Available | Positive | 2686647 - 2687558 | 32614.4 |
| 6-phosphogluconolactonase | BST45_12730 | Not Available | Positive | 2687555 - 2688230 | 23582.0 |
| glutamate synthase large subunit | BST45_12735 | Not Available | Positive | 2689172 - 2693767 | 166465.0 |
| glutamate synthase | BST45_12740 | Not Available | Positive | 2693760 - 2695226 | 53487.9 |
| hypothetical protein | BST45_12745 | Not Available | Positive | 2695700 - 2695912 | 7394.28 |
| php domain-containing protein | BST45_12750 | Not Available | Positive | 2696142 - 2697149 | 36878.7 |
| tetr family transcriptional regulator | BST45_12755 | Not Available | Negative | 2697181 - 2697825 | 23307.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


