Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufd | BST45_12660 | Not Available | Negative | 2668660 - 2669868 | 43047.6 |
| fe-s cluster assembly protein sufb | BST45_12665 | Not Available | Negative | 2669865 - 2673536 | 136268.0 |
| transcriptional regulator | BST45_12670 | Not Available | Negative | 2673533 - 2674345 | 28539.0 |
| hypothetical protein | BST45_12675 | Not Available | Positive | 2674371 - 2676077 | 60019.8 |
| spermidine/putrescine abc transporter atp-binding protein | BST45_12680 | Not Available | Positive | 2676074 - 2677015 | 33414.5 |
| multidrug abc transporter permease | BST45_12685 | Not Available | Positive | 2677012 - 2677803 | 27471.5 |
| hypothetical protein | BST45_12690 | Not Available | Positive | 2677848 - 2678780 | 32343.4 |
| hypothetical protein | BST45_12695 | Not Available | Negative | 2678730 - 2679599 | 31466.4 |
| nadph:quinone reductase | BST45_12700 | Not Available | Positive | 2679619 - 2680599 | 33668.9 |
| protoheme ix farnesyltransferase | BST45_12705 | Not Available | Negative | 2680630 - 2681556 | 33144.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


