Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST45_12560 | Not Available | Negative | 2647094 - 2648101 | 35843.9 |
| hypothetical protein | BST45_12565 | Not Available | Negative | 2648098 - 2649051 | 34381.6 |
| atpase | BST45_12570 | Not Available | Negative | 2649048 - 2650169 | 40393.0 |
| peptidase c40 | BST45_12575 | Not Available | Negative | 2650299 - 2651039 | 25065.0 |
| peptidase m23 | BST45_12580 | Not Available | Negative | 2651050 - 2652465 | 49592.6 |
| hypothetical protein | BST45_12585 | Not Available | Negative | 2652692 - 2653258 | 19911.8 |
| aconitate hydratase | BST45_12590 | Not Available | Positive | 2653452 - 2656268 | 101707.0 |
| tetr family transcriptional regulator | BST45_12595 | Not Available | Positive | 2656279 - 2656842 | 21275.4 |
| transcriptional regulator | BST45_12600 | Not Available | Negative | 2656910 - 2657101 | 7101.41 |
| abc transporter | BST45_12605 | Not Available | Negative | 2657199 - 2658821 | 58078.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


