Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | BST45_01185 | Not Available | Positive | 259452 - 260972 | 54060.6 |
| acyl-coa dehydrogenase | BST45_01190 | Not Available | Positive | 260986 - 262146 | 41309.4 |
| 3-hydroxyisobutyrate dehydrogenase | BST45_01195 | Not Available | Positive | 262157 - 263032 | 29211.2 |
| tigr03086 family protein | BST45_01210 | Not Available | Negative | 264495 - 265043 | 19117.6 |
| marr family transcriptional regulator | BST45_01215 | Not Available | Negative | 265477 - 265977 | 18093.7 |
| hypothetical protein | BST45_01220 | Not Available | Positive | 266378 - 267004 | 22049.9 |
| hypothetical protein | BST45_01235 | Not Available | Negative | 267706 - 268431 | 25290.3 |
| rna polymerase subunit sigma | BST45_01240 | Not Available | Negative | 268504 - 269037 | 19678.4 |
| type i methionyl aminopeptidase | BST45_01245 | Not Available | Negative | 269385 - 270185 | 27328.7 |
| preprotein translocase subunit secy | BST45_01255 | Not Available | Negative | 270787 - 272112 | 47575.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


