Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | BST45_12400 | Not Available | Negative | 2622884 - 2625127 | 81736.3 |
| transcriptional repressor | BST45_12405 | Not Available | Negative | 2625164 - 2625607 | 15905.8 |
| hypothetical protein | BST45_12410 | Not Available | Negative | 2625716 - 2625907 | 6380.93 |
| elongation factor tu | BST45_12415 | Not Available | Negative | 2625987 - 2626256 | 9612.6 |
| hypothetical protein | BST45_12420 | Not Available | Positive | 2626456 - 2626824 | 13567.4 |
| nadp-dependent oxidoreductase | BST45_12425 | Not Available | Negative | 2626963 - 2627976 | 35467.6 |
| hypothetical protein | BST45_12430 | Not Available | Positive | 2628118 - 2628324 | 7390.76 |
| 1,3-beta-glucanase | BST45_12435 | Not Available | Negative | 2628350 - 2629174 | 30463.4 |
| hypothetical protein | BST45_12440 | Not Available | Negative | 2629337 - 2629942 | 22023.6 |
| zn-dependent protease | BST45_12445 | Not Available | Positive | 2630030 - 2631079 | 38281.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


