Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | BST45_01135 | Not Available | Negative | 250697 - 251071 | 14300.5 |
| 50s ribosomal protein l36 | BST45_01140 | Not Available | Negative | 251264 - 251377 | 4329.49 |
| translation initiation factor if-1 | BST45_01145 | Not Available | Negative | 251409 - 251684 | 10490.8 |
| hypothetical protein | BST45_01150 | Not Available | Negative | 251997 - 252806 | 30525.7 |
| llm class f420-dependent oxidoreductase | BST45_01155 | Not Available | Positive | 253202 - 254074 | 30837.7 |
| dtdp-glucose 4,6-dehydratase | BST45_01160 | Not Available | Positive | 254146 - 255141 | 37340.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BST45_01165 | Not Available | Positive | 255143 - 255751 | 22260.2 |
| hypothetical protein | BST45_01170 | Not Available | Positive | 255844 - 256335 | 15683.3 |
| hypothetical protein | BST45_01175 | Not Available | Positive | 256406 - 257929 | 54778.0 |
| hypothetical protein | BST45_01180 | Not Available | Positive | 258070 - 259359 | 46384.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


