Mycobacterium shinjukuense strain CCUG 53584

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium shinjukuense strain CCUG 53584 is a notable species within the genus Mycobacterium, characterized by the presence of flagella, which is relatively uncommon among mycobacteria. This trait may confer motility advantages under certain environmental conditions, potentially aiding in its adaptability and survival. The strain has a single replicon, indicating a streamlined genome organization typical of many prokaryotic organisms. The genome is accessible through the accession number MVIK00000000.1, facilitating further genetic and genomic studies that could enhance our understanding of its biology. In terms of ecological insights, the presence of flagella in Mycobacterium shinjukuense may suggest a specific ecological niche where motility provides selective advantages, such as in biofilms or within host organisms. This capability could influence its interactions with other microorganisms and its role in microbial communities. Overall, the unique traits of Mycobacterium shinjukuense strain CCUG 53584, particularly its flagellar motility, position it as a subject of interest for further research into microbial behavior, ecology, and potential applications in biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium shinjukuense
Strainstrain CCUG 53584

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium shinjukuense strain CCUG 53584

Gene Summary

Adenine Count

711929 bp

Thymine Count

709973 bp

Guanine Count

1491976 bp

Cytosine Count

1496018 bp

Genome Length

4409896 bp

Protein-coding Genes

3834 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-isopropylmalate synthaseBST45_11970Not AvailablePositive2540940 - 254308776774.0
dna polymerase iii subunit epsilonBST45_11975Not AvailableNegative2543116 - 254409935460.6
udp-n-acetylmuramyl peptide synthaseBST45_11985Not AvailablePositive2544232 - 254547043290.8
glutamine amidotransferaseBST45_11990Not AvailablePositive2545463 - 254617024510.7
hypothetical proteinBST45_11995Not AvailableNegative2546167 - 254699430902.2
recombination protein recrBST45_12000Not AvailableNegative2547106 - 254771722273.8
ybab/ebfc family nucleoid-associated proteinBST45_12005Not AvailableNegative2547729 - 254819015116.4
n-acetylmuramoyl-l-alanine amidaseBST45_12010Not AvailablePositive2548289 - 254905025931.8
polyketide cyclaseBST45_12015Not AvailableNegative2549047 - 254949315775.7
fad-linked oxidaseBST45_12020Not AvailablePositive2549538 - 255095052883.8

Displaying genes 2281 – 2290 of 3885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.