Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | BST45_11970 | Not Available | Positive | 2540940 - 2543087 | 76774.0 |
| dna polymerase iii subunit epsilon | BST45_11975 | Not Available | Negative | 2543116 - 2544099 | 35460.6 |
| udp-n-acetylmuramyl peptide synthase | BST45_11985 | Not Available | Positive | 2544232 - 2545470 | 43290.8 |
| glutamine amidotransferase | BST45_11990 | Not Available | Positive | 2545463 - 2546170 | 24510.7 |
| hypothetical protein | BST45_11995 | Not Available | Negative | 2546167 - 2546994 | 30902.2 |
| recombination protein recr | BST45_12000 | Not Available | Negative | 2547106 - 2547717 | 22273.8 |
| ybab/ebfc family nucleoid-associated protein | BST45_12005 | Not Available | Negative | 2547729 - 2548190 | 15116.4 |
| n-acetylmuramoyl-l-alanine amidase | BST45_12010 | Not Available | Positive | 2548289 - 2549050 | 25931.8 |
| polyketide cyclase | BST45_12015 | Not Available | Negative | 2549047 - 2549493 | 15775.7 |
| fad-linked oxidase | BST45_12020 | Not Available | Positive | 2549538 - 2550950 | 52883.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


