Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigj | BST45_11715 | Not Available | Negative | 2483326 - 2484249 | 33353.9 |
| aspartate aminotransferase family protein | BST45_11720 | Not Available | Positive | 2484283 - 2485611 | 47754.0 |
| pe family protein | BST45_11725 | Not Available | Positive | 2485892 - 2486416 | 16300.9 |
| hypothetical protein | BST45_11730 | Not Available | Positive | 2486417 - 2487826 | 45136.4 |
| nadh-quinone oxidoreductase subunit n | BST45_11735 | Not Available | Negative | 2488167 - 2489747 | 54744.0 |
| nadh-quinone oxidoreductase subunit m | BST45_11740 | Not Available | Negative | 2489744 - 2491324 | 56467.7 |
| nadh-quinone oxidoreductase subunit l | BST45_11745 | Not Available | Negative | 2491321 - 2493207 | 65715.1 |
| nadh-quinone oxidoreductase subunit k | BST45_11750 | Not Available | Negative | 2493218 - 2493517 | 10786.7 |
| nadh:ubiquinone oxidoreductase subunit j | BST45_11755 | Not Available | Negative | 2493514 - 2494290 | 26994.3 |
| nadh-quinone oxidoreductase subunit i | BST45_11760 | Not Available | Negative | 2494287 - 2494913 | 23017.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


