Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid phosphatase | BST45_11665 | Not Available | Positive | 2473808 - 2474695 | 31144.8 |
| primosomal protein | BST45_11670 | Not Available | Positive | 2474750 - 2476024 | 45879.8 |
| adenosine deaminase | BST45_11675 | Not Available | Negative | 2476228 - 2477316 | 39725.6 |
| thymidine phosphorylase | BST45_11680 | Not Available | Negative | 2477313 - 2478614 | 44790.9 |
| cytidine deaminase | BST45_11685 | Not Available | Negative | 2478611 - 2479012 | 13906.8 |
| succinate dehydrogenase, cytochrome b556 subunit | BST45_11690 | Not Available | Positive | 2479182 - 2479604 | 15708.5 |
| succinate dehydrogenase | BST45_11695 | Not Available | Positive | 2479601 - 2480071 | 17956.9 |
| succinate dehydrogenase flavoprotein subunit | BST45_11700 | Not Available | Positive | 2480075 - 2481847 | 65138.7 |
| succinate dehydrogenase iron-sulfur subunit | BST45_11705 | Not Available | Positive | 2481847 - 2482641 | 29511.7 |
| transposase | BST45_11710 | Not Available | Positive | 2482755 - 2483360 | 22327.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


