Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desufuration protein sufe | BST45_11515 | Not Available | Positive | 2440669 - 2441100 | 15405.6 |
| acetyl-/propionyl-coa carboxylase subunit alpha | BST45_11520 | Not Available | Positive | 2441211 - 2443004 | 63771.4 |
| rna polymerase subunit sigma | BST45_11525 | Not Available | Negative | 2443011 - 2443799 | 28901.7 |
| anti-sigma factor | BST45_11530 | Not Available | Negative | 2443807 - 2444244 | 15533.4 |
| dna-binding protein | BST45_11535 | Not Available | Negative | 2444429 - 2444779 | 12945.3 |
| hypothetical protein | BST45_11540 | Not Available | Positive | 2445089 - 2445469 | 12885.3 |
| usfy protein | BST45_11545 | Not Available | Positive | 2445653 - 2445961 | 11432.6 |
| hypothetical protein | BST45_11550 | Not Available | Negative | 2445998 - 2446381 | 13417.4 |
| l-lysine 6-transaminase | BST45_11555 | Not Available | Negative | 2446406 - 2447752 | 49041.8 |
| asnc family transcriptional regulator | BST45_11560 | Not Available | Negative | 2447801 - 2448256 | 16521.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


