Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion integral membrane protein eccd | BST45_01085 | Not Available | Positive | 241229 - 242581 | 44068.7 |
| type vii secretion-associated serine protease mycosin | BST45_01090 | Not Available | Positive | 242578 - 243942 | 45400.8 |
| type vii secretion protein eccb | BST45_01095 | Not Available | Negative | 243904 - 245325 | 48733.7 |
| cutinase | BST45_01100 | Not Available | Positive | 245452 - 246249 | 26239.2 |
| cutinase family protein | BST45_01105 | Not Available | Positive | 246281 - 246937 | 22386.8 |
| trna pseudouridine(38-40) synthase trua | BST45_01110 | Not Available | Negative | 246940 - 247782 | 30604.5 |
| 50s ribosomal protein l17 | BST45_01115 | Not Available | Negative | 247778 - 248491 | 25092.3 |
| dna-directed rna polymerase subunit alpha | BST45_01120 | Not Available | Negative | 248532 - 249575 | 37695.6 |
| 30s ribosomal protein s4 | BST45_01125 | Not Available | Negative | 249656 - 250261 | 23440.3 |
| 30s ribosomal protein s11 | BST45_01130 | Not Available | Negative | 250271 - 250693 | 14897.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


