Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lytr family protein | BST45_11295 | Not Available | Positive | 2399223 - 2400773 | 54796.4 |
| hypothetical protein | BST45_11300 | Not Available | Negative | 2400819 - 2401223 | 14572.5 |
| vapc toxin family pin domain ribonuclease | BST45_11305 | Not Available | Negative | 2401325 - 2401774 | 15992.9 |
| prevent-host-death protein | BST45_11310 | Not Available | Negative | 2401779 - 2402030 | 9115.06 |
| short-chain dehydrogenase | BST45_11315 | Not Available | Negative | 2402128 - 2402961 | 28873.6 |
| enoyl-coa hydratase | BST45_11320 | Not Available | Negative | 2403070 - 2404011 | 34854.3 |
| doxx family protein | BST45_11325 | Not Available | Positive | 2404186 - 2404629 | 16114.3 |
| transporter | BST45_11330 | Not Available | Negative | 2404601 - 2405887 | 43057.3 |
| padr family transcriptional regulator | BST45_11335 | Not Available | Positive | 2406143 - 2406445 | 11415.6 |
| trehalose-6-phosphate synthase | BST45_11340 | Not Available | Positive | 2406689 - 2408167 | 54815.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


