Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | BST45_11075 | Not Available | Positive | 2355457 - 2356401 | 33356.2 |
| dihydroorotase | BST45_11080 | Not Available | Positive | 2356398 - 2357702 | 45265.1 |
| transporter | BST45_11085 | Not Available | Positive | 2357803 - 2358297 | 17977.0 |
| carbamoyl phosphate synthase small subunit | BST45_11090 | Not Available | Positive | 2358294 - 2359424 | 39896.2 |
| carbamoyl phosphate synthase large subunit | BST45_11095 | Not Available | Positive | 2359424 - 2362771 | 118995.0 |
| orotidine-5'-phosphate decarboxylase | BST45_11100 | Not Available | Positive | 2362768 - 2363604 | 28109.9 |
| hypothetical protein | BST45_11105 | Not Available | Negative | 2363610 - 2363999 | 14344.0 |
| integration host factor | BST45_11110 | Not Available | Positive | 2364411 - 2364728 | 11507.2 |
| guanylate kinase | BST45_11115 | Not Available | Positive | 2364823 - 2365416 | 21245.5 |
| dna-directed rna polymerase subunit omega | BST45_11120 | Not Available | Positive | 2365474 - 2365806 | 11870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


