Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | BST45_10970 | Not Available | Positive | 2336537 - 2337100 | 20402.2 |
| n utilization substance protein b | BST45_10975 | Not Available | Positive | 2337103 - 2337597 | 17547.1 |
| antitermination protein nusb | BST45_10980 | Not Available | Positive | 2337594 - 2338001 | 14698.2 |
| amino acid decarboxylase | BST45_10985 | Not Available | Positive | 2338148 - 2340997 | 106109.0 |
| antitoxin vapb39 | BST45_10990 | Not Available | Positive | 2341028 - 2341252 | 7994.37 |
| ribonuclease vapc39 | BST45_10995 | Not Available | Positive | 2341249 - 2341668 | 14765.6 |
| hypothetical protein | BST45_11000 | Not Available | Negative | 2341669 - 2342619 | 34827.8 |
| restriction endonuclease | BST45_11010 | Not Available | Positive | 2343310 - 2344230 | 33351.8 |
| vapc toxin family pin domain ribonuclease | BST45_11015 | Not Available | Negative | 2344265 - 2344666 | 15301.3 |
| duf2191 domain-containing protein | BST45_11020 | Not Available | Negative | 2344663 - 2344890 | 8350.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


