Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST45_10915 | Not Available | Negative | 2326322 - 2326984 | 24146.7 |
| hypothetical protein | BST45_10920 | Not Available | Positive | 2326975 - 2327199 | 7793.61 |
| hypothetical protein | BST45_10930 | Not Available | Negative | 2328558 - 2328872 | 10132.9 |
| pe family protein | BST45_10935 | Not Available | Negative | 2329060 - 2330865 | 49680.0 |
| chorismate synthase | BST45_10940 | Not Available | Positive | 2331370 - 2332575 | 41762.9 |
| shikimate kinase | BST45_10945 | Not Available | Positive | 2332579 - 2333109 | 18726.6 |
| 3-dehydroquinate synthase | BST45_10950 | Not Available | Positive | 2333106 - 2334194 | 37987.3 |
| type ii 3-dehydroquinate dehydratase | BST45_10955 | Not Available | Positive | 2334191 - 2334628 | 15520.7 |
| hypothetical protein | BST45_10960 | Not Available | Negative | 2334697 - 2335371 | 24053.7 |
| peptidase m24 family protein | BST45_10965 | Not Available | Positive | 2335404 - 2336522 | 38984.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


