Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | BST45_00985 | Not Available | Negative | 219195 - 219821 | 21287.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | BST45_00990 | Not Available | Negative | 219818 - 220261 | 16154.5 |
| alanine racemase | BST45_00995 | Not Available | Negative | 220317 - 221483 | 41170.8 |
| glutamate decarboxylase | BST45_01000 | Not Available | Negative | 221756 - 223138 | 50728.4 |
| bifunctional adp-dependent (s)-nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | BST45_01005 | Not Available | Negative | 223161 - 224582 | 46912.4 |
| hypothetical protein | BST45_01010 | Not Available | Negative | 224617 - 225330 | 26890.2 |
| duf4436 domain-containing protein | BST45_01015 | Not Available | Negative | 225392 - 226237 | 30288.1 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | BST45_01020 | Not Available | Negative | 226380 - 228257 | 67193.1 |
| hypothetical protein | BST45_01025 | Not Available | Positive | 229000 - 229218 | 7780.6 |
| hypothetical protein | BST45_01030 | Not Available | Positive | 229344 - 230195 | 29398.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


