Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine dehydrogenase (aminomethyl-transferring) | BST45_10385 | Not Available | Positive | 2224671 - 2227583 | 103117.0 |
| serine hydroxymethyltransferase | BST45_10390 | Not Available | Positive | 2227666 - 2228943 | 45585.5 |
| l-serine ammonia-lyase | BST45_10395 | Not Available | Positive | 2228940 - 2230325 | 48523.0 |
| short-chain dehydrogenase | BST45_10400 | Not Available | Negative | 2230344 - 2231255 | 32282.6 |
| tetr family transcriptional regulator | BST45_10405 | Not Available | Positive | 2231369 - 2231932 | 20172.2 |
| isocitrate dehydrogenase (nadp(+)) | BST45_10410 | Not Available | Positive | 2232054 - 2234285 | 82498.7 |
| acyl-coa dehydrogenase | BST45_10415 | Not Available | Positive | 2234392 - 2235603 | 43874.3 |
| toxin protein | BST45_10420 | Not Available | Positive | 2235660 - 2235845 | 6361.74 |
| 1,4-beta-glucanase | BST45_10430 | Not Available | Negative | 2237307 - 2238359 | 36440.8 |
| hypothetical protein | BST45_10435 | Not Available | Positive | 2238770 - 2239114 | 12015.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


