Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | BST45_09735 | Not Available | Positive | 2097436 - 2098140 | 25047.1 |
| hypothetical protein | BST45_09740 | Not Available | Negative | 2098141 - 2098479 | 11756.0 |
| hypothetical protein | BST45_09745 | Not Available | Positive | 2098736 - 2099551 | 28229.1 |
| fad-linked oxidoreductase | BST45_09750 | Not Available | Negative | 2099569 - 2100810 | 44102.8 |
| geranylgeranyl pyrophosphate synthase | BST45_09755 | Not Available | Positive | 2100833 - 2101840 | 35667.5 |
| zinc metalloprotease htpx | BST45_09760 | Not Available | Positive | 2101938 - 2102801 | 30902.9 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | BST45_09765 | Not Available | Negative | 2102805 - 2103830 | 36186.8 |
| fad-dependent oxidoreductase | BST45_09770 | Not Available | Negative | 2103854 - 2105359 | 56123.8 |
| yajq family cyclic di-gmp-binding protein | BST45_09775 | Not Available | Negative | 2105436 - 2105927 | 18109.6 |
| Trna-tyr | Not Available | Not Available | Positive | 2105997 - 2106080 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


