Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST45_09470 | Not Available | Positive | 2035272 - 2036606 | 47848.0 |
| 2,3-dihydroxybiphenyl 1,2-dioxygenase | BST45_09475 | Not Available | Positive | 2036725 - 2037861 | 41478.3 |
| fumarylacetoacetase | BST45_09480 | Not Available | Positive | 2037858 - 2038808 | 33595.4 |
| 3-(3-hydroxyphenyl)propionate hydroxylase | BST45_09485 | Not Available | Positive | 2038829 - 2040388 | 57115.1 |
| vapc toxin family pin domain ribonuclease | BST45_09490 | Not Available | Negative | 2040307 - 2040723 | 14536.5 |
| prevent-host-death family protein | BST45_09495 | Not Available | Negative | 2040727 - 2040999 | 9742.05 |
| merr family transcriptional regulator | BST45_09500 | Not Available | Negative | 2041025 - 2041390 | 12692.0 |
| universal stress protein uspa | BST45_09505 | Not Available | Negative | 2041567 - 2042466 | 31408.7 |
| universal stress protein | BST45_09510 | Not Available | Negative | 2042570 - 2043454 | 31107.3 |
| hypothetical protein | BST45_09520 | Not Available | Negative | 2044494 - 2044967 | 16676.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


