Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vapc toxin family pin domain ribonuclease | BST45_09420 | Not Available | Positive | 2027235 - 2027657 | 15450.2 |
| vapc toxin family pin domain ribonuclease | BST45_09425 | Not Available | Negative | 2028152 - 2028586 | 15551.8 |
| hypothetical protein | BST45_09430 | Not Available | Negative | 2028570 - 2028773 | 7068.46 |
| vapc toxin family pin domain ribonuclease | BST45_09435 | Not Available | Negative | 2029120 - 2029518 | 14453.3 |
| hypothetical protein | BST45_09440 | Not Available | Negative | 2029505 - 2029750 | 9124.86 |
| cadmium-translocating p-type atpase | BST45_09445 | Not Available | Negative | 2029998 - 2032313 | 79327.2 |
| hypothetical protein | BST45_09450 | Not Available | Negative | 2032300 - 2032590 | 9800.62 |
| transcriptional regulator | BST45_09455 | Not Available | Negative | 2032593 - 2032961 | 13117.8 |
| hypothetical protein | BST45_09460 | Not Available | Positive | 2033109 - 2034506 | 51427.4 |
| hypothetical protein | BST45_09465 | Not Available | Positive | 2034517 - 2035272 | 28758.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


