Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-methanol-choline oxidoreductase | BST45_09310 | Not Available | Negative | 2007064 - 2008650 | 56806.1 |
| hypothetical protein | BST45_09315 | Not Available | Negative | 2008671 - 2011250 | 92466.8 |
| dna repair exonuclease | BST45_09320 | Not Available | Negative | 2011247 - 2012398 | 41144.4 |
| hypothetical protein | BST45_09330 | Not Available | Positive | 2013198 - 2013680 | 16799.0 |
| hypothetical protein | BST45_09335 | Not Available | Positive | 2013702 - 2013966 | 7417.39 |
| prevent-host-death protein | BST45_09345 | Not Available | Positive | 2015726 - 2015974 | 9038.7 |
| vapc toxin family pin domain ribonuclease | BST45_09350 | Not Available | Positive | 2015978 - 2016373 | 13842.7 |
| prevent-host-death protein | BST45_09355 | Not Available | Positive | 2016512 - 2016733 | 8393.19 |
| vapc toxin family pin domain ribonuclease | BST45_09360 | Not Available | Positive | 2016730 - 2017143 | 14515.2 |
| fad-linked oxidoreductase | BST45_09365 | Not Available | Positive | 2017444 - 2018883 | 49172.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


