Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | BST45_09200 | Not Available | Negative | 1979902 - 1981320 | 50345.2 |
| arginine--trna ligase | BST45_09205 | Not Available | Negative | 1981317 - 1982969 | 59430.6 |
| Trna-arg | Not Available | Not Available | Positive | 1983083 - 1983158 | Not Available |
| pe family protein | BST45_09215 | Not Available | Positive | 1983393 - 1986128 | 80627.5 |
| transcriptional regulator | BST45_09220 | Not Available | Negative | 1986241 - 1986900 | 23455.3 |
| hypothetical protein | BST45_09230 | Not Available | Positive | 1988874 - 1990310 | 50496.2 |
| hypothetical protein | BST45_09235 | Not Available | Negative | 1990247 - 1990438 | 6207.22 |
| adp-ribose pyrophosphatase | BST45_09240 | Not Available | Negative | 1990435 - 1990971 | 20240.0 |
| hypothetical protein | BST45_09245 | Not Available | Negative | 1991003 - 1991470 | 17588.9 |
| potassium transporter trka | BST45_09250 | Not Available | Positive | 1991627 - 1993363 | 62164.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


