Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4199 domain-containing protein | BST45_08875 | Not Available | Negative | 1912819 - 1913340 | 18312.3 |
| hypothetical protein | BST45_08880 | Not Available | Positive | 1913543 - 1914136 | 20071.8 |
| magnesium transporter | BST45_08885 | Not Available | Positive | 1914206 - 1915510 | 47220.2 |
| hypothetical protein | BST45_08890 | Not Available | Positive | 1915507 - 1916049 | 20493.6 |
| lytic transglycosylase | BST45_08895 | Not Available | Positive | 1916165 - 1917511 | 45444.7 |
| sodium:proton antiporter | BST45_08900 | Not Available | Positive | 1917555 - 1918709 | 40074.7 |
| twin arginine-targeting protein translocase tatb | BST45_08905 | Not Available | Negative | 1918784 - 1919158 | 13243.8 |
| serine protease | BST45_08910 | Not Available | Negative | 1919211 - 1920728 | 52353.0 |
| rna polymerase subunit sigma-70 | BST45_08915 | Not Available | Negative | 1920878 - 1921264 | 13899.4 |
| rna polymerase sigma factor sige | BST45_08920 | Not Available | Negative | 1921421 - 1922185 | 28589.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


