Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin | BST45_08545 | Not Available | Positive | 1845300 - 1845545 | 9210.19 |
| vapc toxin family pin domain ribonuclease | BST45_08550 | Not Available | Positive | 1845542 - 1845946 | 14417.2 |
| hypothetical protein | BST45_08555 | Not Available | Positive | 1846051 - 1846659 | 21887.2 |
| hypothetical protein | BST45_08560 | Not Available | Positive | 1846673 - 1847185 | 18161.5 |
| hypothetical protein | BST45_08565 | Not Available | Positive | 1847182 - 1847613 | 14636.2 |
| hypothetical protein | BST45_08570 | Not Available | Positive | 1847640 - 1848122 | 16411.4 |
| spermidine synthase | BST45_08575 | Not Available | Positive | 1848119 - 1849678 | 54357.2 |
| transcriptional regulator | BST45_08580 | Not Available | Positive | 1849733 - 1851007 | 47333.2 |
| transcriptional regulator | BST45_08585 | Not Available | Negative | 1851050 - 1851805 | 26852.3 |
| glutamine amidotransferase subunit pdxt | BST45_08590 | Not Available | Negative | 1852085 - 1852681 | 21232.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


