Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-rha--alpha-d-glcnac-pyrophosphate polyprenol alpha-3-l-rhamnosyltransferase | BST45_08270 | Not Available | Negative | 1785550 - 1786479 | 34124.7 |
| dtdp-4-dehydrorhamnose reductase | BST45_08275 | Not Available | Negative | 1786472 - 1787389 | 32057.6 |
| lytr family transcriptional regulator | BST45_08280 | Not Available | Positive | 1787479 - 1788945 | 50224.2 |
| hypothetical protein | BST45_08285 | Not Available | Positive | 1789064 - 1789345 | 9680.64 |
| copper-translocating p-type atpase | BST45_08290 | Not Available | Positive | 1789351 - 1791537 | 77472.8 |
| hypothetical protein | BST45_08295 | Not Available | Negative | 1791550 - 1792206 | 22594.2 |
| coa transferase | BST45_08300 | Not Available | Positive | 1792311 - 1793489 | 41983.4 |
| carbonic anhydrase | BST45_08305 | Not Available | Positive | 1793769 - 1796069 | 79959.3 |
| acyl-coa dehydrogenase | BST45_08310 | Not Available | Negative | 1796033 - 1797202 | 41698.6 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | BST45_08315 | Not Available | Negative | 1797216 - 1797731 | 17341.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


