Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST45_07915 | Not Available | Negative | 1715455 - 1716063 | 22451.1 |
| monooxygenase | BST45_07920 | Not Available | Negative | 1716443 - 1717006 | 20617.5 |
| 2,3-dihydroxybiphenyl 1,2-dioxygenase | BST45_07925 | Not Available | Negative | 1717009 - 1717911 | 33322.9 |
| alpha/beta hydrolase | BST45_07930 | Not Available | Negative | 1717908 - 1718789 | 32215.5 |
| monooxygenase | BST45_07935 | Not Available | Negative | 1718802 - 1719986 | 43258.9 |
| 3-ketosteroid-9-alpha-hydroxylase | BST45_07940 | Not Available | Positive | 1720148 - 1721224 | 38216.3 |
| hypothetical protein | BST45_07945 | Not Available | Positive | 1721270 - 1721800 | 18684.2 |
| acyl-coa dehydrogenase | BST45_07950 | Not Available | Negative | 1721898 - 1724030 | 74983.0 |
| tetr family transcriptional regulator | BST45_07955 | Not Available | Positive | 1724249 - 1724914 | 24356.1 |
| laci family transcriptional regulator | BST45_07960 | Not Available | Negative | 1725086 - 1726165 | 38096.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


