Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | BST45_06945 | Not Available | Positive | 1516228 - 1518159 | 68437.0 |
| ribonuclease d | BST45_06950 | Not Available | Negative | 1518156 - 1519427 | 45851.8 |
| hypothetical protein | BST45_06955 | Not Available | Negative | 1519429 - 1520010 | 20580.2 |
| enoyl-coa hydratase | BST45_06960 | Not Available | Negative | 1520173 - 1520979 | 28910.7 |
| uroporphyrinogen decarboxylase | BST45_06965 | Not Available | Positive | 1521066 - 1522157 | 38489.6 |
| protoporphyrinogen oxidase | BST45_06970 | Not Available | Positive | 1522154 - 1523515 | 46702.9 |
| hypothetical protein | BST45_06975 | Not Available | Positive | 1523521 - 1524216 | 26315.3 |
| peptide-methionine (r)-s-oxide reductase | BST45_06980 | Not Available | Negative | 1524298 - 1524705 | 15327.1 |
| hypothetical protein | BST45_06985 | Not Available | Negative | 1524702 - 1526006 | 49139.9 |
| alpha/beta hydrolase | BST45_06990 | Not Available | Negative | 1526029 - 1527600 | 53566.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


