Mycobacterium shinjukuense strain CCUG 53584

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium shinjukuense strain CCUG 53584 is a notable species within the genus Mycobacterium, characterized by the presence of flagella, which is relatively uncommon among mycobacteria. This trait may confer motility advantages under certain environmental conditions, potentially aiding in its adaptability and survival. The strain has a single replicon, indicating a streamlined genome organization typical of many prokaryotic organisms. The genome is accessible through the accession number MVIK00000000.1, facilitating further genetic and genomic studies that could enhance our understanding of its biology. In terms of ecological insights, the presence of flagella in Mycobacterium shinjukuense may suggest a specific ecological niche where motility provides selective advantages, such as in biofilms or within host organisms. This capability could influence its interactions with other microorganisms and its role in microbial communities. Overall, the unique traits of Mycobacterium shinjukuense strain CCUG 53584, particularly its flagellar motility, position it as a subject of interest for further research into microbial behavior, ecology, and potential applications in biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium shinjukuense
Strainstrain CCUG 53584

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium shinjukuense strain CCUG 53584


Gene Summary

Adenine Count

711929 bp

Thymine Count

709973 bp

Guanine Count

1491976 bp

Cytosine Count

1496018 bp

Genome Length

4409896 bp

Protein-coding Genes

3834 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coa transferaseBST45_00565Not AvailableNegative123026 - 12421040587.6
acyl dehydrataseBST45_00570Not AvailableNegative124232 - 12526636327.2
acyl-coa dehydrogenaseBST45_00575Not AvailablePositive125304 - 12646441596.1
phosphoenolpyruvate carboxykinaseBST45_00580Not AvailableNegative126478 - 12829867173.5
hypothetical proteinBST45_00585Not AvailableNegative128491 - 13014357970.0
hypothetical proteinBST45_00590Not AvailableNegative130056 - 13117738760.5
trna (guanosine(46)-n7)-methyltransferase trmbBST45_00595Not AvailablePositive131319 - 13208327734.4
nyn domain-containing proteinBST45_00600Not AvailablePositive132092 - 13281425780.8
hypothetical proteinBST45_00605Not AvailablePositive132881 - 135826104482.0
ai-2e family transporterBST45_00610Not AvailableNegative135845 - 13699639453.3

Displaying genes 111 – 120 of 3885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.