Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BST45_05905 | Not Available | Negative | 1277236 - 1278573 | 47028.0 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | BST45_05910 | Not Available | Positive | 1278655 - 1279452 | 27755.2 |
| glutamate--trna ligase | BST45_05915 | Not Available | Positive | 1279449 - 1280921 | 54329.4 |
| Trna-gln | Not Available | Not Available | Positive | 1281049 - 1281123 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1281160 - 1281232 | Not Available |
| ppox class f420-dependent enzyme | BST45_05930 | Not Available | Negative | 1281234 - 1281746 | 18989.6 |
| transcriptional regulator | BST45_05935 | Not Available | Negative | 1281853 - 1282554 | 24365.4 |
| 3-isopropylmalate dehydratase large subunit | BST45_05940 | Not Available | Positive | 1282604 - 1284019 | 49894.9 |
| 3-isopropylmalate dehydratase small subunit | BST45_05945 | Not Available | Positive | 1284045 - 1284641 | 21922.0 |
| dna-binding protein | BST45_05950 | Not Available | Positive | 1284864 - 1285523 | 22570.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


