Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotyrosine protein phosphatase | BST45_05850 | Not Available | Negative | 1265151 - 1265975 | 30393.0 |
| acyl-coa dehydrogenase | BST45_05855 | Not Available | Negative | 1265968 - 1267200 | 45085.9 |
| nad(p) transhydrogenase subunit alpha | BST45_05860 | Not Available | Positive | 1267399 - 1268523 | 38467.9 |
| nad(p) transhydrogenase subunit beta | BST45_05870 | Not Available | Positive | 1269105 - 1270529 | 48609.1 |
| tetr family transcriptional regulator | BST45_05875 | Not Available | Positive | 1270797 - 1271420 | 23244.5 |
| pe family protein | BST45_05880 | Not Available | Negative | 1271426 - 1272934 | 52157.1 |
| alpha/beta hydrolase | BST45_05885 | Not Available | Negative | 1273068 - 1273970 | 32036.6 |
| hnh endonuclease | BST45_05890 | Not Available | Negative | 1274054 - 1274581 | 19237.6 |
| phosphoglycerate dehydrogenase | BST45_05895 | Not Available | Positive | 1274773 - 1276359 | 54571.4 |
| 3-isopropylmalate dehydrogenase | BST45_05900 | Not Available | Positive | 1276374 - 1277384 | 35526.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


