Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3093 domain-containing protein | BST45_05265 | Not Available | Positive | 1144605 - 1145144 | 19459.5 |
| hypothetical protein | BST45_05270 | Not Available | Positive | 1145141 - 1145377 | 8122.18 |
| stas domain-containing protein | BST45_05275 | Not Available | Negative | 1145374 - 1145829 | 16296.7 |
| hypothetical protein | BST45_05285 | Not Available | Negative | 1147560 - 1147862 | 10843.1 |
| hypothetical protein | BST45_05290 | Not Available | Negative | 1147872 - 1148741 | 30225.4 |
| hypothetical protein | BST45_05295 | Not Available | Positive | 1148923 - 1149141 | 6021.93 |
| gaba permease | BST45_05300 | Not Available | Positive | 1150670 - 1152043 | 48787.1 |
| nitroreductase family deazaflavin-dependent oxidoreductase | BST45_05305 | Not Available | Negative | 1152040 - 1152432 | 14639.7 |
| hypothetical protein | BST45_05310 | Not Available | Positive | 1152549 - 1154006 | 47342.9 |
| glutamate-1-semialdehyde-2,1-aminomutase | BST45_05315 | Not Available | Positive | 1154087 - 1155472 | 47689.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


