Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | BST45_05215 | Not Available | Negative | 1132614 - 1133519 | 34403.0 |
| hypothetical protein | BST45_05220 | Not Available | Negative | 1133543 - 1134043 | 18516.0 |
| hydrolase | BST45_05225 | Not Available | Negative | 1134209 - 1135120 | 32255.3 |
| hypothetical protein | BST45_05230 | Not Available | Positive | 1135642 - 1136079 | 15698.2 |
| hypothetical protein | BST45_05235 | Not Available | Positive | 1136076 - 1138979 | 106219.0 |
| hypothetical protein | BST45_05240 | Not Available | Positive | 1138997 - 1139281 | 10420.4 |
| glutamyl-trna reductase | BST45_05245 | Not Available | Positive | 1139356 - 1140783 | 49932.9 |
| hydroxymethylbilane synthase | BST45_05250 | Not Available | Positive | 1140797 - 1141747 | 32848.2 |
| bifunctional uroporphyrinogen-iii c-methyltransferase/uroporphyrinogen-iii synthase | BST45_05255 | Not Available | Positive | 1141764 - 1143473 | 59681.3 |
| delta-aminolevulinic acid dehydratase | BST45_05260 | Not Available | Positive | 1143587 - 1144567 | 34524.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


