Thioalkalivibrio denitrificans strain ALJD

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Thioalkalivibrio

Description

Thioalkalivibrio denitrificans strain ALJD is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number MVBK00000000.1, which provides a reference for further genomic studies and analysis. The ecological significance of Thioalkalivibrio denitrificans strain ALJD lies in its metabolic capabilities, particularly in the context of sulfur and nitrogen cycles. As a denitrifying bacterium, it plays a crucial role in converting nitrate to nitrogen gas, thereby influencing the nitrogen balance in its habitat. This process can contribute to nutrient cycling in aquatic and soil environments, offering insights into biogeochemical processes that sustain ecosystem health. Moreover, the ability of T. denitrificans to thrive in alkaline conditions suggests its potential utility in biotechnological applications, such as bioremediation of environments impacted by nitrogenous compounds. Understanding the traits of this strain enhances our knowledge of microbial diversity and functional roles in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusThioalkalivibrio
SpeciesThioalkalivibrio denitrificans
Strainstrain ALJD

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Thioalkalivibrio denitrificans strain ALJD
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioalkalivibrio denitrificans strain ALJD Ga0073317_1167, whole

Gene Summary

Adenine Count

645397 bp

Thymine Count

642851 bp

Guanine Count

1173932 bp

Cytosine Count

1174365 bp

Genome Length

3639353 bp

Protein-coding Genes

3348 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase s41B1C78_16680Not AvailableNegative3513579 - 351488647648.9
peptidase m23B1C78_16685Not AvailableNegative3515159 - 351631343184.9
transcriptional regulatorB1C78_16690Not AvailablePositive3516481 - 351680111975.6
glutaredoxin 3B1C78_16700Not AvailablePositive3517245 - 351752910363.3
thiol reductase thioredoxinB1C78_16705Not AvailablePositive3517526 - 351796615958.2
protein-export chaperone secbB1C78_16710Not AvailablePositive3518175 - 351869619126.5
glycerol-3-phosphate dehydrogenaseB1C78_16715Not AvailablePositive3518709 - 351971335061.1
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlB1C78_16720Not AvailableNegative3519817 - 352029317487.9
dihydroorotate dehydrogenase b catalytic subunitB1C78_16725Not AvailablePositive3520292 - 352126934321.1
conserved coiled coil proteinB1C78_16730Not AvailableNegative3521460 - 352174711553.4

Displaying genes 3271 – 3280 of 3401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.