Thioalkalivibrio denitrificans strain ALJD

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Thioalkalivibrio

Description

Thioalkalivibrio denitrificans strain ALJD is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number MVBK00000000.1, which provides a reference for further genomic studies and analysis. The ecological significance of Thioalkalivibrio denitrificans strain ALJD lies in its metabolic capabilities, particularly in the context of sulfur and nitrogen cycles. As a denitrifying bacterium, it plays a crucial role in converting nitrate to nitrogen gas, thereby influencing the nitrogen balance in its habitat. This process can contribute to nutrient cycling in aquatic and soil environments, offering insights into biogeochemical processes that sustain ecosystem health. Moreover, the ability of T. denitrificans to thrive in alkaline conditions suggests its potential utility in biotechnological applications, such as bioremediation of environments impacted by nitrogenous compounds. Understanding the traits of this strain enhances our knowledge of microbial diversity and functional roles in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusThioalkalivibrio
SpeciesThioalkalivibrio denitrificans
Strainstrain ALJD

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Thioalkalivibrio denitrificans strain ALJD
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioalkalivibrio denitrificans strain ALJD Ga0073317_1167, whole

Gene Summary

Adenine Count

645397 bp

Thymine Count

642851 bp

Guanine Count

1173932 bp

Cytosine Count

1174365 bp

Genome Length

3639353 bp

Protein-coding Genes

3348 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-dependent isocitrate dehydrogenaseB1C78_16530Not AvailablePositive3477996 - 347925545834.7
atp-dependent clp protease adapter clpsB1C78_16535Not AvailablePositive3479402 - 347971912022.5
atp-dependent clp protease atp-binding subunit clpaB1C78_16540Not AvailablePositive3479741 - 348200283363.1
translation initiation factor if-1B1C78_16545Not AvailableNegative3482111 - 34823298386.26
[acyl-carrier-protein] s-malonyltransferaseB1C78_16550Not AvailablePositive3482539 - 348347432215.4
3-oxoacyl-acp reductaseB1C78_16555Not AvailablePositive3483537 - 348428025612.0
acyl carrier proteinB1C78_16560Not AvailablePositive3484527 - 34847668867.3
beta-ketoacyl-[acyl-carrier-protein] synthase iiB1C78_16565Not AvailablePositive3484887 - 348612542844.1
aminodeoxychorismate synthase, component iB1C78_16570Not AvailablePositive3486181 - 348746747469.8
aminodeoxychorismate lyaseB1C78_16575Not AvailablePositive3487464 - 348802220581.0

Displaying genes 3241 – 3250 of 3401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.