Thioalkalivibrio denitrificans strain ALJD

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Thioalkalivibrio

Description

Thioalkalivibrio denitrificans strain ALJD is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number MVBK00000000.1, which provides a reference for further genomic studies and analysis. The ecological significance of Thioalkalivibrio denitrificans strain ALJD lies in its metabolic capabilities, particularly in the context of sulfur and nitrogen cycles. As a denitrifying bacterium, it plays a crucial role in converting nitrate to nitrogen gas, thereby influencing the nitrogen balance in its habitat. This process can contribute to nutrient cycling in aquatic and soil environments, offering insights into biogeochemical processes that sustain ecosystem health. Moreover, the ability of T. denitrificans to thrive in alkaline conditions suggests its potential utility in biotechnological applications, such as bioremediation of environments impacted by nitrogenous compounds. Understanding the traits of this strain enhances our knowledge of microbial diversity and functional roles in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusThioalkalivibrio
SpeciesThioalkalivibrio denitrificans
Strainstrain ALJD

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Thioalkalivibrio denitrificans strain ALJD
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioalkalivibrio denitrificans strain ALJD Ga0073317_1167, whole

Gene Summary

Adenine Count

645397 bp

Thymine Count

642851 bp

Guanine Count

1173932 bp

Cytosine Count

1174365 bp

Genome Length

3639353 bp

Protein-coding Genes

3348 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome maturation factor rimpB1C78_15460Not AvailablePositive3250782 - 325124016763.9
transcription termination/antitermination protein nusaB1C78_15465Not AvailablePositive3251323 - 325282855670.8
translation initiation factor if-2B1C78_15470Not AvailablePositive3252963 - 325550691146.0
ribosome-binding factor aB1C78_15475Not AvailablePositive3255537 - 325592614748.4
trna pseudouridine(55) synthase trubB1C78_15480Not AvailablePositive3256134 - 325705133307.2
30s ribosomal protein s15B1C78_15485Not AvailablePositive3257327 - 325759610282.5
polyribonucleotide nucleotidyltransferaseB1C78_15490Not AvailablePositive3257622 - 325970375009.0
hypothetical proteinB1C78_15495Not AvailableNegative3259850 - 326065824020.9
hypothetical proteinB1C78_15500Not AvailableNegative3261196 - 326189725074.2
hypothetical proteinB1C78_15505Not AvailablePositive3261920 - 326250722136.3

Displaying genes 3031 – 3040 of 3401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.