Thioalkalivibrio denitrificans strain ALJD

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Thioalkalivibrio

Description

Thioalkalivibrio denitrificans strain ALJD is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number MVBK00000000.1, which provides a reference for further genomic studies and analysis. The ecological significance of Thioalkalivibrio denitrificans strain ALJD lies in its metabolic capabilities, particularly in the context of sulfur and nitrogen cycles. As a denitrifying bacterium, it plays a crucial role in converting nitrate to nitrogen gas, thereby influencing the nitrogen balance in its habitat. This process can contribute to nutrient cycling in aquatic and soil environments, offering insights into biogeochemical processes that sustain ecosystem health. Moreover, the ability of T. denitrificans to thrive in alkaline conditions suggests its potential utility in biotechnological applications, such as bioremediation of environments impacted by nitrogenous compounds. Understanding the traits of this strain enhances our knowledge of microbial diversity and functional roles in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusThioalkalivibrio
SpeciesThioalkalivibrio denitrificans
Strainstrain ALJD

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Thioalkalivibrio denitrificans strain ALJD
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioalkalivibrio denitrificans strain ALJD Ga0073317_1167, whole

Gene Summary

Adenine Count

645397 bp

Thymine Count

642851 bp

Guanine Count

1173932 bp

Cytosine Count

1174365 bp

Genome Length

3639353 bp

Protein-coding Genes

3348 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
preprotein translocase subunit secaB1C78_15360Not AvailableNegative3230298 - 3233090104998.0
hypothetical proteinB1C78_15365Not AvailableNegative3233215 - 323412933229.6
hypothetical proteinB1C78_15370Not AvailablePositive3234229 - 323466615785.4
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaB1C78_15375Not AvailablePositive3234733 - 323552428788.4
trna guanosine(34) transglycosylase tgtB1C78_15380Not AvailablePositive3235509 - 323662441300.7
preprotein translocase subunit yajcB1C78_15385Not AvailablePositive3236703 - 323703211767.5
protein-export membrane protein secdB1C78_15390Not AvailablePositive3237088 - 323895968528.2
protein-export membrane protein secfB1C78_15395Not AvailablePositive3238975 - 323992234404.1
hypothetical proteinB1C78_15400Not AvailableNegative3239982 - 324034412735.4
inositol monophosphataseB1C78_15405Not AvailableNegative3240605 - 324138127806.3

Displaying genes 3011 – 3020 of 3401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.