Thioalkalivibrio denitrificans strain ALJD

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Thioalkalivibrio

Description

Thioalkalivibrio denitrificans strain ALJD is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number MVBK00000000.1, which provides a reference for further genomic studies and analysis. The ecological significance of Thioalkalivibrio denitrificans strain ALJD lies in its metabolic capabilities, particularly in the context of sulfur and nitrogen cycles. As a denitrifying bacterium, it plays a crucial role in converting nitrate to nitrogen gas, thereby influencing the nitrogen balance in its habitat. This process can contribute to nutrient cycling in aquatic and soil environments, offering insights into biogeochemical processes that sustain ecosystem health. Moreover, the ability of T. denitrificans to thrive in alkaline conditions suggests its potential utility in biotechnological applications, such as bioremediation of environments impacted by nitrogenous compounds. Understanding the traits of this strain enhances our knowledge of microbial diversity and functional roles in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusThioalkalivibrio
SpeciesThioalkalivibrio denitrificans
Strainstrain ALJD

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Thioalkalivibrio denitrificans strain ALJD
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioalkalivibrio denitrificans strain ALJD Ga0073317_1167, whole

Gene Summary

Adenine Count

645397 bp

Thymine Count

642851 bp

Guanine Count

1173932 bp

Cytosine Count

1174365 bp

Genome Length

3639353 bp

Protein-coding Genes

3348 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integration host factor subunit betaB1C78_07155Not AvailablePositive1500828 - 150115111858.3
hypothetical proteinB1C78_07160Not AvailablePositive1501170 - 150146310869.0
lipopolysaccharide assembly protein lapbB1C78_07165Not AvailablePositive1501466 - 150265945099.7
orotidine 5'-phosphate decarboxylaseB1C78_07170Not AvailablePositive1502920 - 150364225133.1
competence protein comeaB1C78_07175Not AvailablePositive1503745 - 15040149592.77
utp--glucose-1-phosphate uridylyltransferaseB1C78_07180Not AvailablePositive1504119 - 150500632515.2
alanine--glyoxylate aminotransferaseB1C78_07185Not AvailableNegative1505133 - 150631442205.9
glycolate oxidase iron-sulfur subunitB1C78_07190Not AvailableNegative1506407 - 150763945086.3
glycolate oxidase subunit glceB1C78_07195Not AvailableNegative1507642 - 150870937419.7
phosphoprotein phosphataseB1C78_07200Not AvailableNegative1508787 - 150953027968.0

Displaying genes 1401 – 1410 of 3401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.