Massilia sp. KIM

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Massilia sp. KIM is a Gram-negative bacterium characterized by its rod-shaped morphology. As a member of the genus Massilia, this organism is part of the diverse group of bacteria that are often found in various environmental niches. One notable feature of Massilia sp. KIM is that it possesses a single replicon, which is indicative of its genomic organization. The type strain of Massilia sp. KIM is cataloged under the accession number MVAD00000000.1, which provides a reference point for researchers interested in studying its genetic makeup and potential applications. This accession allows for the exploration of the strain's genomic characteristics, aiding in the understanding of its metabolic capabilities and ecological interactions. In ecological terms, the presence of Massilia sp. KIM in its environment may contribute to nutrient cycling and the degradation of organic matter, a common trait observed in many members of the Massilia genus. The Gram-negative nature of this bacterium suggests it may have specific adaptations to survive in competitive microbial communities, potentially influencing the dynamics of microbial ecosystems. Understanding the role of Massilia sp. KIM within its habitat can provide insights into its ecological significance and the broader implications for microbial diversity and function in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia sp. KIM
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Massilia sp. KIM
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia sp. KIM NODE_17_length_538_cov_97.7007_ID_1339, whole

Gene Summary

Adenine Count

940332 bp

Thymine Count

945086 bp

Guanine Count

1924965 bp

Cytosine Count

1924005 bp

Genome Length

5734887 bp

Protein-coding Genes

4879 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione s-transferaseB0920_22475Not AvailableNegative5094968 - 509568426472.8
nad-dependent dehydrataseB0920_22480Not AvailableNegative5095702 - 509666434525.9
lytic transglycosylaseB0920_22485Not AvailableNegative5096672 - 509897282142.9
5-formyltetrahydrofolate cyclo-ligaseB0920_22490Not AvailablePositive5099035 - 509964921722.2
methylenetetrahydrofolate reductaseB0920_22495Not AvailableNegative5099766 - 510059630291.2
hypothetical proteinB0920_22500Not AvailableNegative5100583 - 510093913079.6
adenosylhomocysteinaseB0920_22505Not AvailableNegative5101165 - 510257751903.2
methionine adenosyltransferaseB0920_22510Not AvailableNegative5102952 - 510411842285.1
lipid a biosynthesis acyltransferaseB0920_22515Not AvailablePositive5104304 - 510515531351.3
lipid a biosynthesis acyltransferaseB0920_22520Not AvailablePositive5105152 - 510601232980.6

Displaying genes 4431 – 4440 of 4994 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.