Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. VT-16-41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1102541 bp
Thymine Count
1109492 bp
Guanine Count
1815453 bp
Cytosine Count
1810127 bp
Genome Length
5837613 bp
Protein-coding Genes
5186 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | BTM36_20400 | Not Available | Positive | 4391713 - 4393512 | 65199.6 |
| hybrid sensor histidine kinase/response regulator | BTM36_20405 | Not Available | Positive | 4393535 - 4395139 | 57958.4 |
| 3-oxoadipate enol-lactonase | BTM36_20410 | Not Available | Negative | 4395177 - 4395956 | 27715.2 |
| muconolactone delta-isomerase | BTM36_20415 | Not Available | Negative | 4396030 - 4396317 | 10726.1 |
| lysr family transcriptional regulator | BTM36_20420 | Not Available | Negative | 4396521 - 4397474 | 35933.5 |
| muconate cycloisomerase | BTM36_20425 | Not Available | Positive | 4397619 - 4398824 | 42441.2 |
| catechol 1,2-dioxygenase | BTM36_20430 | Not Available | Positive | 4398876 - 4399811 | 33651.9 |
| benzoate 1,2-dioxygenase large subunit | BTM36_20435 | Not Available | Positive | 4399909 - 4401294 | 52366.6 |
| benzoate 1,2-dioxygenase small subunit | BTM36_20440 | Not Available | Positive | 4401291 - 4401794 | 19538.0 |
| nadh oxidase | BTM36_20445 | Not Available | Positive | 4401817 - 4402848 | 36533.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



