Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. VT-16-41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1102541 bp
Thymine Count
1109492 bp
Guanine Count
1815453 bp
Cytosine Count
1810127 bp
Genome Length
5837613 bp
Protein-coding Genes
5186 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase | BTM36_18870 | Not Available | Negative | 4047505 - 4047954 | 16649.6 |
| alcohol dehydrogenase | BTM36_18875 | Not Available | Negative | 4047951 - 4049102 | 40296.8 |
| hypothetical protein | BTM36_18880 | Not Available | Positive | 4049391 - 4050416 | 37362.2 |
| phenylacetic acid degradation protein paay | BTM36_18885 | Not Available | Positive | 4050441 - 4051055 | 21896.5 |
| hypothetical protein | BTM36_18890 | Not Available | Negative | 4051180 - 4052718 | 54470.7 |
| mfs transporter | BTM36_18895 | Not Available | Negative | 4052992 - 4054347 | 48834.6 |
| fad-binding monooxygenase | BTM36_18900 | Not Available | Negative | 4054463 - 4056022 | 56499.7 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase | BTM36_18905 | Not Available | Negative | 4056019 - 4056894 | 31711.9 |
| glyoxalase | BTM36_18910 | Not Available | Negative | 4056926 - 4057831 | 32700.8 |
| aminocarboxymuconate-semialdehyde decarboxylase | BTM36_18915 | Not Available | Negative | 4057860 - 4058897 | 37562.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



