Herbaspirillum sp. VT-16-41

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum sp. VT-16-41 is a Gram-negative bacterium notable for its possession of flagella, which suggests a degree of motility. This trait can enhance its ability to navigate through various environments, possibly contributing to its ecological adaptability. The organism contains a single replicon, which is characteristic of many bacteria and indicates a simpler genomic structure compared to those with multiple replicons. The accession number for Herbaspirillum sp. VT-16-41 is MUXB00000000.1, which provides a reference point for researchers interested in genomic data related to this strain. The availability of such genetic information can facilitate further studies into its metabolic pathways, environmental interactions, and potential applications in biotechnology. In terms of broader biological or ecological significance, the presence of flagella in Herbaspirillum sp. VT-16-41 may play a crucial role in its survival and competitiveness within its ecological niche. The ability to move toward more favorable conditions or away from harmful substances can enhance its success in diverse habitats. This motility, combined with its Gram-negative status, positions it among the myriad of microbial life forms that contribute to nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum sp. VT-16-41
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum sp. VT-16-41

Gene Summary

Adenine Count

1102541 bp

Thymine Count

1109492 bp

Guanine Count

1815453 bp

Cytosine Count

1810127 bp

Genome Length

5837613 bp

Protein-coding Genes

5186 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
salicylaldehyde dehydrogenaseBTM36_17135Not AvailablePositive3660890 - 366234150472.4
mfs transporterBTM36_17140Not AvailablePositive3662551 - 366393048270.1
2-dehydropantoate 2-reductaseBTM36_17145Not AvailablePositive3663927 - 366486832889.7
3-oxoacyl-acp reductaseBTM36_17150Not AvailableNegative3664968 - 366572026276.7
nad-dependent succinate-semialdehyde dehydrogenaseBTM36_17155Not AvailablePositive3665903 - 366736952075.8
xylulokinaseBTM36_17160Not AvailablePositive3667372 - 366889853457.9
phosphoglycolate phosphataseBTM36_17165Not AvailablePositive3668895 - 366961125426.3
transcriptional regulatorBTM36_17170Not AvailablePositive3669608 - 367044730882.3
ribose 5-phosphate isomerase aBTM36_17175Not AvailablePositive3670497 - 367121026111.6
sugar abc transporter substrate-binding proteinBTM36_17180Not AvailablePositive3671386 - 367246539843.7

Displaying genes 3311 – 3320 of 5268 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.