Herbaspirillum sp. VT-16-41

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum sp. VT-16-41 is a Gram-negative bacterium notable for its possession of flagella, which suggests a degree of motility. This trait can enhance its ability to navigate through various environments, possibly contributing to its ecological adaptability. The organism contains a single replicon, which is characteristic of many bacteria and indicates a simpler genomic structure compared to those with multiple replicons. The accession number for Herbaspirillum sp. VT-16-41 is MUXB00000000.1, which provides a reference point for researchers interested in genomic data related to this strain. The availability of such genetic information can facilitate further studies into its metabolic pathways, environmental interactions, and potential applications in biotechnology. In terms of broader biological or ecological significance, the presence of flagella in Herbaspirillum sp. VT-16-41 may play a crucial role in its survival and competitiveness within its ecological niche. The ability to move toward more favorable conditions or away from harmful substances can enhance its success in diverse habitats. This motility, combined with its Gram-negative status, positions it among the myriad of microbial life forms that contribute to nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum sp. VT-16-41
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum sp. VT-16-41

Gene Summary

Adenine Count

1102541 bp

Thymine Count

1109492 bp

Guanine Count

1815453 bp

Cytosine Count

1810127 bp

Genome Length

5837613 bp

Protein-coding Genes

5186 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobalamin biosynthesis protein cbigBTM36_14365Not AvailablePositive3055490 - 305631129164.3
precorrin-3b c(17)-methyltransferaseBTM36_14370Not AvailablePositive3056474 - 305803356899.1
cobalamin biosynthesis protein p47kBTM36_14375Not AvailablePositive3058036 - 305917540356.3
cob(i)yrinic acid a,c-diamide adenosyltransferaseBTM36_14380Not AvailablePositive3059201 - 305980322434.2
cobyrinic acid a,c-diamide synthaseBTM36_14385Not AvailablePositive3059803 - 306113747213.1
5,6-dimethylbenzimidazole synthaseBTM36_14390Not AvailablePositive3061134 - 306183226367.9
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseBTM36_14395Not AvailablePositive3061829 - 306244021990.4
cobalamin biosynthesis proteinBTM36_14400Not AvailablePositive3062434 - 306338133872.6
threonine-phosphate decarboxylaseBTM36_14405Not AvailablePositive3063374 - 306439636426.5
cobyric acid synthase cobqBTM36_14410Not AvailablePositive3064389 - 306587653132.6

Displaying genes 2761 – 2770 of 5268 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.